BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033H11SP1|AL429824
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1027 1516 0.0
3x_Contig1600 163 8e-40
>3x_Contig1027
Length = 4522
Score = 1516 bits (765), Expect = 0.0
Identities = 772/773 (99%), Gaps = 1/773 (0%)
Strand = Plus / Plus
Query: 1 tcttcagataattcatcagagtagtgcgcagttcttctctctctattacctcttcctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3751 tcttcagataattcatcagagtagtgcgcagttcttctctctctattacctcttcctcca 3810
Query: 61 acaaacacgttctgcttttcctcttctgcaagctttgcttcaatgtcaacattgtaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3811 acaaacacgttctgcttttcctcttctgcaagctttgcttcaatgtcaacattgtaacat 3870
Query: 121 tcaggaagctctgagttctccataagtctgtttgttataccgttttccatctgtgttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3871 tcaggaagctctgagttctccataagtctgtttgttataccgttttccatctgtgttctg 3930
Query: 181 atcctttgagcatccaactcctggaatacttttatttcattttcgtttctcgccaagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3931 atcctttgagcatccaactcctggaatacttttatttcattttcgtttctcgccaagatt 3990
Query: 241 tcattgagttcgttatcatccaactgctcttcttcttcaatgcctaactcacgtcttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3991 tcattgagttcgttatcatccaactgctcttcttcttcaatgcctaactcacgtcttttc 4050
Query: 301 ttttcctcttcctcagcttctagtaacgatctcaataatgcctcttgttcttcagctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4051 ttttcctcttcctcagcttctagtaacgatctcaataatgcctcttgttcttcagctgtt 4110
Query: 361 gatttgttatcaaacttacctgcttgaataacttttccgtcaatgtccaatttggcatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4111 gatttgttatcaaacttacctgcttgaataacttttccgtcaatgtccaatttggcatgc 4170
Query: 421 gccttatcaagaattgcttcttccactgaattgtctgtaattaatctaagaatacgcact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4171 gccttatcaagaattgcttcttccactgaattgtctgtaattaatctaagaatacgcact 4230
Query: 481 tcattcttttgaccgattctatgagctctgtcttgggcctgtaaatcctggtgaggattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4231 tcattcttttgaccgattctatgagctctgtcttgggcctgtaaatcctggtgaggattc 4290
Query: 541 caatcagtatcaaaaatgataacggtatctgcagtttgcaaatttaaacctaaaccacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4291 caatcagtatcaaaaatgataacggtatctgcagtttgcaaatttaaacctaaaccacca 4350
Query: 601 gctcttgtagataaaaggaaacagaaataatcagagtttggggcattgaaagtgtttaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4351 gctcttgtagataaaaggaaacagaaataatcagagtttggggcattgaaagtgtttaat 4410
Query: 661 aatgcagtacgatcatcagatttagtatgaccgtctaatcttaagtatttcatgtcaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4411 aatgcagtacgatcatcagatttagtatgaccgtctaatcttaagtatttcatgtcaaga 4470
Query: 721 tatctcaagaaatcttccatgatatccataacttgcgtcatttggaagaaaat 773
|||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4471 tatctcaagaaatcttccatgatatccataacttgcgtca-ttggaagaaaat 4522
>3x_Contig1600
Length = 9359
Score = 163 bits (82), Expect = 8e-40
Identities = 225/270 (83%), Gaps = 2/270 (0%)
Strand = Plus / Minus
Query: 343 tcttgttcttcagctgttgatttgttatcaaacttacctgcttgaataacttttccgtca 402
|||||||||||||| || ||||| || ||||| ||||| |||||||||||||| || |||
Sbjct: 1740 tcttgttcttcagcagtagatttattgtcaaatttaccggcttgaataactttaccatca 1681
Query: 403 atgtccaatttg-gcatgcgccttatcaagaattgcttcttccactgaattgtctgtaat 461
|| |||||||| |||| || | || ||||| ||||||| || |||| | ||| ||
Sbjct: 1680 atatccaatttttgcatt-gctctctctagaataacttcttcgacggaatcggttgttat 1622
Query: 462 taatctaagaatacgcacttcattcttttgaccgattctatgagctctgtcttgggcctg 521
|||||| | |||||| ||||| ||||| || || ||||| |||||||| |||||||| ||
Sbjct: 1621 taatctcaaaatacgaacttcgttcttctgcccaattctgtgagctctatcttgggcttg 1562
Query: 522 taaatcctggtgaggattccaatcagtatcaaaaatgataacggtatctgcagtttgcaa 581
||||||||| |||||||||||||||||||| ||||| || || ||||| ||||| |||||
Sbjct: 1561 taaatcctgatgaggattccaatcagtatcgaaaataatgaccgtatcagcagtctgcaa 1502
Query: 582 atttaaacctaaaccaccagctcttgtaga 611
||||| |||||| ||||||||||| |||||
Sbjct: 1501 atttagacctaacccaccagctctggtaga 1472
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9094
Number of Sequences: 1807
Number of extensions: 9094
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 2
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)